BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B01SP1|AL425632
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1506 0.0
>3x_Contig1498
Length = 12634
Score = 1506 bits (758), Expect = 0.0
Identities = 777/784 (99%), Gaps = 1/784 (0%)
Strand = Plus / Minus
Query: 1 atcgccagttctcgtctcaatacgataggtaattcaccttaccaatccaatktatattkt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 11052 atcgccagttctcgtctcaatacgataggtaattcaccttaccaatccaatgtatattgt 10993
Query: 61 gttatgtatcttatacaaatcatgatatctccgatttcactagataatgaaaatcgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10992 gttatgtatcttatacaaatcatgatatctccgatttcactagataatgaaaatcgattt 10933
Query: 121 tactcagttcaaaagtaagttataaraattcaatgaagcactgacgtggtgaacattcgc 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10932 tactcagttcaaaagtaagttataagaattcaatgaagcactgacgtggtgaacattcgc 10873
Query: 181 cgcaattgtgcagtggcagcccctgatagtatgatcacaaacctttatatttgtgtctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10872 cgcaattgtgcagtggcagcccctgatagtatgatcacaaacctttatatttgtgtctga 10813
Query: 241 tctgcttatgttatagctttaccgttcaatatgatagcttcaagtatcaaaaaatttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10812 tctgcttatgttatagctttaccgttcaatatgatagcttcaagtatcaaaaaatttgaa 10753
Query: 301 ggacatggtgtgagagaagagatgagcggtcatagtacaacttgtttaaggatatccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10752 ggacatggtgtgagagaagagatgagcggtcatagtacaacttgtttaaggatatccatt 10693
Query: 361 acaattggtgagtgaaccaagccttagttaagcccaattcaggaccgaactatatctgat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10692 acaattggtgagtgaaccaagccttagttaagcccaattcaggaccgaactatatctgac 10633
Query: 421 cctttctgctacccgtttttttttcccgctctttagctggtgggttactacaataaattg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10632 cctttctgctacccgtttttttttcccgctctttagctggtgggttactacaataaattc 10573
Query: 481 tttgaagatagtttcttaaacaaatccatcaagcttattgacattgttgtcgcatagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10572 tttgaagatagtttcttaaacaaatccatcaagcttattgacattgttgtcgcatagctg 10513
Query: 541 aatcaagggcagggaagagtaggtgcaggtgggaattatgtcgctattgaaagtttcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10512 aatcaagggcagggaagagtaggtgcaggtgggaattatgtcgctattgaaagtttcagc 10453
Query: 601 gatgaatgccaggcttcccagcaacgtgactgtaatacgacgtgggctgaacgtttgcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10452 gatgaatgccaggcttcccagcaacgtgactgtaatacgacgtgggctgaacgtttgcct 10393
Query: 661 aag-acacattggaagagctagatattattcgacaacgatacgagagatcaatggaaacg 719
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10392 aagcacacattggaagagctagatattattcgacaacgatacgagagatcaatgggaacg 10333
Query: 720 atgaatctaataataataaggagctacggaatagagaggttgctggatggattcagcaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10332 atgaatctaataataataaggagctacggaatagagaggttgctggatggattcagcaat 10273
Query: 780 cttt 783
||||
Sbjct: 10272 cttt 10269
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5740
Number of Sequences: 1807
Number of extensions: 5740
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)